Statistics
Number of enzymes: 1
Total Number of designed primers: 6
Number of PGTM primers: 2
Number of PMTM primers: 4
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103320996 NCBI Gene Symbol: LOC103320996 |
Gene Aliases | |
Gene description & Other designations | Description: D-galacturonate reductase-like Other designations: D-galacturonate reductase-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 4 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 13765073 ...... 13767226 |
CDS Sequence | 103320996 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (GCCAAA)2 |
Repeat start & end within CDS | Repeat start: 718 Repeat end: 729 |
Forward primer | Primer sequence: GACCTCCTTTCCATCGCCAA Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CGTCAAGGACCAACCGAAGA Tm(°C): 59.967 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 525 End: 851 Product size (bp): 327 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103320996 NCBI Gene Symbol: LOC103320996 |
Gene Aliases | |
Gene description & Other designations | Description: D-galacturonate reductase-like Other designations: D-galacturonate reductase-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 4 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 13765073 ...... 13767226 |
CDS Sequence | 103320996 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (GGA)3 |
Repeat start & end within CDS | Repeat start: 852 Repeat end: 860 |
Forward primer | Primer sequence: TCTTCGGTTGGTCCTTGACG Tm(°C): 59.967 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: TATCATGCGGCCCCAAAAGT Tm(°C): 60.034 GC (%): 50 Size: 20 |
Primer start, end within sequence and product size | Start: 832 End: 930 Product size (bp): 99 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103320996 NCBI Gene Symbol: LOC103320996 |
Gene Aliases | |
Gene description & Other designations | Description: D-galacturonate reductase-like Other designations: D-galacturonate reductase-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 4 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 13765073 ...... 13767226 |
CDS Sequence | 103320996 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: GACCTCCTTTCCATCGCCAA Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CGTCAAGGACCAACCGAAGA Tm(°C): 59.967 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 525 End: 851 Product size (bp): 327 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103320997 NCBI Gene Symbol: LOC103320997 |
Gene Aliases | |
Gene description & Other designations | Description: D-galacturonate reductase-like Other designations: D-galacturonate reductase-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 3 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 13775999 ...... 13777788 |
CDS Sequence | 103320997 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (GCCAAA)2 |
Repeat start & end within CDS | Repeat start: 715 Repeat end: 726 |
Forward primer | Primer sequence: TTGGAGATGAGCCCAGCTTG Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CCTCGTCAGTCAACGACCAA Tm(°C): 59.968 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 564 End: 855 Product size (bp): 292 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103320997 NCBI Gene Symbol: LOC103320997 |
Gene Aliases | |
Gene description & Other designations | Description: D-galacturonate reductase-like Other designations: D-galacturonate reductase-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 3 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 13775999 ...... 13777788 |
CDS Sequence | 103320997 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (CAA)3 |
Repeat start & end within CDS | Repeat start: 795 Repeat end: 803 |
Forward primer | Primer sequence: TTGGAGATGAGCCCAGCTTG Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CCTCGTCAGTCAACGACCAA Tm(°C): 59.968 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 564 End: 855 Product size (bp): 292 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103320997 NCBI Gene Symbol: LOC103320997 |
Gene Aliases | |
Gene description & Other designations | Description: D-galacturonate reductase-like Other designations: D-galacturonate reductase-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 3 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 13775999 ...... 13777788 |
CDS Sequence | 103320997 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: TTGGAGATGAGCCCAGCTTG Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CCTCGTCAGTCAACGACCAA Tm(°C): 59.968 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 564 End: 855 Product size (bp): 292 |
JBrowse View | JBrowse |