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Statistics

Number of enzymes: 1
Total Number of designed primers: 5
Number of PGTM primers:     1
Number of PMTM primers:     4

Enzyme Id:  K13427

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   PHAVU_011G015300g     NCBI Gene Symbol: PHAVU_011G015300g
Gene Aliases PHAVU_011G015300g
Gene description & Other designations Description:   hypothetical protein      Other designations:   hypothetical protein
Chromosome, Strand & Exon count Chromosome:   11     Strand:   minus     Exon count:   13
Gene Location within genomic sequence Genomic accession No. NC_023749.1      Gene Start and end within genomic accession: 1209779 ...... 1215625
CDS Sequence PHAVU_011G015300g
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (CCAAAT)2
Repeat start & end within CDS Repeat start: 47     Repeat end: 58
Forward primer Primer sequence:   TGGCGCTTAAAACCCTATCCA     Tm(°C): 59.718     GC (%): 47.619     Size: 21
Reverse primer Primer sequence:   AAGTCGCAGAGAATGAGGCC     Tm(°C): 60.108     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1     End: 106     Product size (bp): 106
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Enzyme Id:  K13427

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   PHAVU_011G015300g     NCBI Gene Symbol: PHAVU_011G015300g
Gene Aliases PHAVU_011G015300g
Gene description & Other designations Description:   hypothetical protein      Other designations:   hypothetical protein
Chromosome, Strand & Exon count Chromosome:   11     Strand:   minus     Exon count:   13
Gene Location within genomic sequence Genomic accession No. NC_023749.1      Gene Start and end within genomic accession: 1209779 ...... 1215625
CDS Sequence PHAVU_011G015300g
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Compound     Repeat sequence: (CCG)3aatcggaaggaaccgg(CGC)3
Repeat start & end within CDS Repeat start: 134     Repeat end: 167
Forward primer Primer sequence:   GGCCTCATTCTCTGCGACTT     Tm(°C): 60.108     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CGGTTCTAAGCTGACGGTGT     Tm(°C): 60.039     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 87     End: 402     Product size (bp): 316
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Enzyme Id:  K13427

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   PHAVU_011G015300g     NCBI Gene Symbol: PHAVU_011G015300g
Gene Aliases PHAVU_011G015300g
Gene description & Other designations Description:   hypothetical protein      Other designations:   hypothetical protein
Chromosome, Strand & Exon count Chromosome:   11     Strand:   minus     Exon count:   13
Gene Location within genomic sequence Genomic accession No. NC_023749.1      Gene Start and end within genomic accession: 1209779 ...... 1215625
CDS Sequence PHAVU_011G015300g
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (GAA)3
Repeat start & end within CDS Repeat start: 375     Repeat end: 383
Forward primer Primer sequence:   GGCCTCATTCTCTGCGACTT     Tm(°C): 60.108     GC (%): 55     Size: 20
Reverse primer Primer sequence:   ACGGTTCTAAGCTGACGGTG     Tm(°C): 60.039     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 87     End: 403     Product size (bp): 317
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Enzyme Id:  K13427

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   PHAVU_011G015300g     NCBI Gene Symbol: PHAVU_011G015300g
Gene Aliases PHAVU_011G015300g
Gene description & Other designations Description:   hypothetical protein      Other designations:   hypothetical protein
Chromosome, Strand & Exon count Chromosome:   11     Strand:   minus     Exon count:   13
Gene Location within genomic sequence Genomic accession No. NC_023749.1      Gene Start and end within genomic accession: 1209779 ...... 1215625
CDS Sequence PHAVU_011G015300g
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (AGG)3
Repeat start & end within CDS Repeat start: 987     Repeat end: 995
Forward primer Primer sequence:   TAAATGATCCAGTGGCCGCA     Tm(°C): 59.746     GC (%): 50     Size: 20
Reverse primer Primer sequence:   GAAGGAAAGGCCCCTCAGTC     Tm(°C): 60.035     GC (%): 60     Size: 20
Primer start, end within sequence and product size Start: 889     End: 1106     Product size (bp): 218
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Enzyme Id:  K13427

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   PHAVU_011G015300g     NCBI Gene Symbol: PHAVU_011G015300g
Gene Aliases PHAVU_011G015300g
Gene description & Other designations Description:   hypothetical protein      Other designations:   hypothetical protein
Chromosome, Strand & Exon count Chromosome:   11     Strand:   minus     Exon count:   13
Gene Location within genomic sequence Genomic accession No. NC_023749.1      Gene Start and end within genomic accession: 1209779 ...... 1215625
CDS Sequence PHAVU_011G015300g
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   GACTGAGGGGCCTTTCCTTC     Tm(°C): 60.035     GC (%): 60     Size: 20
Reverse primer Primer sequence:   GGTATCGGTGGCCTCACAAA     Tm(°C): 60.036     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1087     End: 1582     Product size (bp): 496
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