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Statistics

Number of enzymes: 1
Total Number of designed primers: 8
Number of PGTM primers:     1
Number of PMTM primers:     7

Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (TCCTCT)2
Repeat start & end within CDS Repeat start: 453     Repeat end: 464
Forward primer Primer sequence:   GGCCAGTCTGCAAATGTTGG     Tm(°C): 60.038     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CACTAATCAAGGGGCCTGCA     Tm(°C): 60.034     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 294     End: 528     Product size (bp): 235
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Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (CAA)3
Repeat start & end within CDS Repeat start: 937     Repeat end: 945
Forward primer Primer sequence:   ACTGCTACAGTTTCACCCGG     Tm(°C): 59.965     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CATGGGTTGACTGGCTAGCA     Tm(°C): 60.035     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 852     End: 1197     Product size (bp): 346
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Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Di     Repeat sequence: (CT)4
Repeat start & end within CDS Repeat start: 1100     Repeat end: 1107
Forward primer Primer sequence:   ACTGCTACAGTTTCACCCGG     Tm(°C): 59.965     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CATGGGTTGACTGGCTAGCA     Tm(°C): 60.035     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 852     End: 1197     Product size (bp): 346
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Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (TGATGC)2
Repeat start & end within CDS Repeat start: 1566     Repeat end: 1577
Forward primer Primer sequence:   AGAGCCTGGCAAAGTAGCTG     Tm(°C): 60.036     GC (%): 55     Size: 20
Reverse primer Primer sequence:   GCATCACGACCACCAGTACT     Tm(°C): 59.753     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1394     End: 1684     Product size (bp): 291
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Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (CCAGCC)2
Repeat start & end within CDS Repeat start: 1783     Repeat end: 1794
Forward primer Primer sequence:   AGTACTGGTGGTCGTGATGC     Tm(°C): 59.753     GC (%): 55     Size: 20
Reverse primer Primer sequence:   GGTGCTACTCCACGTTCCTT     Tm(°C): 59.679     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1665     End: 2014     Product size (bp): 350
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Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (TTCAGA)2
Repeat start & end within CDS Repeat start: 1926     Repeat end: 1937
Forward primer Primer sequence:   TGTTTCTTCACCAGCCCCAG     Tm(°C): 60.179     GC (%): 55     Size: 20
Reverse primer Primer sequence:   ATGGTGCTACTCCACGTTCC     Tm(°C): 59.751     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1772     End: 2016     Product size (bp): 245
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Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (GCAAAA)2
Repeat start & end within CDS Repeat start: 2563     Repeat end: 2574
Forward primer Primer sequence:   GCTGAACAGGAAGTTGCACG     Tm(°C): 60.041     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CACCTTCACATGTTCCCGGA     Tm(°C): 59.964     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 2538     End: 2846     Product size (bp): 309
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Enzyme Id:  K12824

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   101250296     NCBI Gene Symbol: LOC101250296
Gene Aliases
Gene description & Other designations Description:   pre-mRNA-processing protein 40C      Other designations:   pre-mRNA-processing protein 40C
Chromosome, Strand & Exon count Chromosome:   4     Strand:   plus     Exon count:   20
Gene Location within genomic sequence Genomic accession No. NC_015441.3      Gene Start and end within genomic accession: 2355972 ...... 2378893
CDS Sequence 101250296
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   ACTGCTACAGTTTCACCCGG     Tm(°C): 59.965     GC (%): 55     Size: 20
Reverse primer Primer sequence:   TTTCAGTCCGGTGAGCAGTC     Tm(°C): 59.966     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 852     End: 1323     Product size (bp): 472
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