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Statistics

Number of enzymes: 1
Total Number of designed primers: 5
Number of PGTM primers:     1
Number of PMTM primers:     4

Enzyme Id:  K12447

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103319759     NCBI Gene Symbol: LOC103319759
Gene Aliases
Gene description & Other designations Description:   UDP-sugar pyrophosphorylase      Other designations:   UDP-sugar pyrophosphorylase
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   17
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 6676266 ...... 6684232
CDS Sequence 103319759
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TGA)3
Repeat start & end within CDS Repeat start: 177     Repeat end: 185
Forward primer Primer sequence:   ACCGCCGAACAGATTGAGTT     Tm(°C): 59.965     GC (%): 50     Size: 20
Reverse primer Primer sequence:   GCCGAGTCACCTGATCGAAA     Tm(°C): 60.109     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 93     End: 219     Product size (bp): 127
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Enzyme Id:  K12447

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103319759     NCBI Gene Symbol: LOC103319759
Gene Aliases
Gene description & Other designations Description:   UDP-sugar pyrophosphorylase      Other designations:   UDP-sugar pyrophosphorylase
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   17
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 6676266 ...... 6684232
CDS Sequence 103319759
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Compound     Repeat sequence: (CTACT)2ctagcggccttctaaatatttggcgtgaggctggtttgagatgg(GT
TCT)2
Repeat start & end within CDS Repeat start: 805     Repeat end: 868
Forward primer Primer sequence:   GGGCATGGTGATGTGCATTC     Tm(°C): 59.896     GC (%): 55     Size: 20
Reverse primer Primer sequence:   TTTTGCTTTCCGTGGCACAG     Tm(°C): 59.898     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 783     End: 974     Product size (bp): 192
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Enzyme Id:  K12447

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103319759     NCBI Gene Symbol: LOC103319759
Gene Aliases
Gene description & Other designations Description:   UDP-sugar pyrophosphorylase      Other designations:   UDP-sugar pyrophosphorylase
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   17
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 6676266 ...... 6684232
CDS Sequence 103319759
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (AGAAGT)2
Repeat start & end within CDS Repeat start: 1512     Repeat end: 1523
Forward primer Primer sequence:   CCGGAGTCCAAGTTGCTGAT     Tm(°C): 60.036     GC (%): 55     Size: 20
Reverse primer Primer sequence:   GAGGACCCAGCCCTTGTTTT     Tm(°C): 60.179     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1465     End: 1745     Product size (bp): 281
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Enzyme Id:  K12447

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103319759     NCBI Gene Symbol: LOC103319759
Gene Aliases
Gene description & Other designations Description:   UDP-sugar pyrophosphorylase      Other designations:   UDP-sugar pyrophosphorylase
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   17
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 6676266 ...... 6684232
CDS Sequence 103319759
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (GTTCA)2
Repeat start & end within CDS Repeat start: 1718     Repeat end: 1727
Forward primer Primer sequence:   CCGGAGTCCAAGTTGCTGAT     Tm(°C): 60.036     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CCTCAGTTCCTCAGGTACCG     Tm(°C): 59.182     GC (%): 60     Size: 20
Primer start, end within sequence and product size Start: 1465     End: 1790     Product size (bp): 326
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Enzyme Id:  K12447

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103319759     NCBI Gene Symbol: LOC103319759
Gene Aliases
Gene description & Other designations Description:   UDP-sugar pyrophosphorylase      Other designations:   UDP-sugar pyrophosphorylase
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   17
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 6676266 ...... 6684232
CDS Sequence 103319759
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   GAAGCTATCGAACCTCGGCA     Tm(°C): 59.898     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CCGCCCAATGCTCAAACAAA     Tm(°C): 59.967     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 29     End: 165     Product size (bp): 137
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