Statistics
Number of enzymes: 1
Total Number of designed primers: 6
Number of PGTM primers: 2
Number of PMTM primers: 4
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103318635 NCBI Gene Symbol: LOC103318635 |
Gene Aliases | |
Gene description & Other designations | Description: GDP-mannose 3;5-epimerase 2 Other designations: GDP-mannose 3;5-epimerase 2 |
Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 25437108 ...... 25440746 |
CDS Sequence | 103318635 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Compound Repeat sequence: (CATTA)2ttgcttctgattg(GAA)3 |
Repeat start & end within CDS | Repeat start: 154 Repeat end: 185 |
Forward primer | Primer sequence: TGGGGAGTACTGGTGGACAT Tm(°C): 59.882 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: GTTGGACTGGATGAAGCCCA Tm(°C): 59.962 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 1 End: 332 Product size (bp): 332 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103318635 NCBI Gene Symbol: LOC103318635 |
Gene Aliases | |
Gene description & Other designations | Description: GDP-mannose 3;5-epimerase 2 Other designations: GDP-mannose 3;5-epimerase 2 |
Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 25437108 ...... 25440746 |
CDS Sequence | 103318635 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (GCCTG)2 |
Repeat start & end within CDS | Repeat start: 490 Repeat end: 499 |
Forward primer | Primer sequence: GGCTTCATCCAGTCCAACCA Tm(°C): 59.962 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: TTCTCCCTCCCACCTTTCCA Tm(°C): 60.104 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 315 End: 646 Product size (bp): 332 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103318635 NCBI Gene Symbol: LOC103318635 |
Gene Aliases | |
Gene description & Other designations | Description: GDP-mannose 3;5-epimerase 2 Other designations: GDP-mannose 3;5-epimerase 2 |
Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 25437108 ...... 25440746 |
CDS Sequence | 103318635 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (CCTTCA)2 |
Repeat start & end within CDS | Repeat start: 728 Repeat end: 739 |
Forward primer | Primer sequence: GAACCTGGAAAGGTGGGAGG Tm(°C): 59.962 GC (%): 60 Size: 20 |
Reverse primer | Primer sequence: GAGCCCAGCCAAGTTTCTCT Tm(°C): 59.963 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 622 End: 957 Product size (bp): 336 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103318635 NCBI Gene Symbol: LOC103318635 |
Gene Aliases | |
Gene description & Other designations | Description: GDP-mannose 3;5-epimerase 2 Other designations: GDP-mannose 3;5-epimerase 2 |
Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 25437108 ...... 25440746 |
CDS Sequence | 103318635 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: GACTTCCGTGAGCCAGTGAA Tm(°C): 59.966 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: ATCGACAGGTCAGTGCCTTG Tm(°C): 60.037 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 780 End: 1051 Product size (bp): 272 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103324176 NCBI Gene Symbol: LOC103324176 |
Gene Aliases | |
Gene description & Other designations | Description: GDP-mannose 3;5-epimerase 1-like Other designations: GDP-mannose 3;5-epimerase 1-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 8 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 39369996 ...... 39372922 |
CDS Sequence | 103324176 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (AGAGAA)2 |
Repeat start & end within CDS | Repeat start: 1020 Repeat end: 1031 |
Forward primer | Primer sequence: ACGCGGTCTTTCACCTTCAT Tm(°C): 59.965 GC (%): 50 Size: 20 |
Reverse primer | Primer sequence: ACCTGACAAATTCATGCCTTGA Tm(°C): 58.501 GC (%): 40.909 Size: 22 |
Primer start, end within sequence and product size | Start: 723 End: 1055 Product size (bp): 333 |
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|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103324176 NCBI Gene Symbol: LOC103324176 |
Gene Aliases | |
Gene description & Other designations | Description: GDP-mannose 3;5-epimerase 1-like Other designations: GDP-mannose 3;5-epimerase 1-like |
Chromosome, Strand & Exon count | Chromosome: LG2 Strand: plus Exon count: 8 |
Gene Location within genomic sequence | Genomic accession No. NC_024127.1 Gene Start and end within genomic accession: 39369996 ...... 39372922 |
CDS Sequence | 103324176 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: TTCGGGTTTCCATAACGGGG Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: GGCCAAGCATCAGACTCCTT Tm(°C): 60.035 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 82 End: 499 Product size (bp): 418 |
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