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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103329845 NCBI Gene Symbol: LOC103329845 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 4; peroxisomal Other designations: monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic |
Chromosome, Strand & Exon count | Chromosome: LG4 Strand: plus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024129.1 Gene Start and end within genomic accession: 20968397 ...... 20972173 |
CDS Sequence | 103329845 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Compound Repeat sequence: (AC)4cacccaaaggaagaggg(GA)13 |
Repeat start & end within CDS | Repeat start: 140 Repeat end: 190 |
Forward primer | Primer sequence: GCGCGTGTCACATTCACATT Tm(°C): 60.11 GC (%): 50 Size: 20 |
Reverse primer | Primer sequence: CAGGTCTCTCATAAGGCGGC Tm(°C): 60.25 GC (%): 60 Size: 20 |
Primer start, end within sequence and product size | Start: 30 End: 330 Product size (bp): 301 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103329845 NCBI Gene Symbol: LOC103329845 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 4; peroxisomal Other designations: monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic |
Chromosome, Strand & Exon count | Chromosome: LG4 Strand: plus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024129.1 Gene Start and end within genomic accession: 20968397 ...... 20972173 |
CDS Sequence | 103329845 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (TGG)3 |
Repeat start & end within CDS | Repeat start: 693 Repeat end: 701 |
Forward primer | Primer sequence: TGGTGGGAATGCTGTTGTCA Tm(°C): 59.815 GC (%): 50 Size: 20 |
Reverse primer | Primer sequence: ATAGGCTTGTGTTGGGACGG Tm(°C): 60.035 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 671 End: 987 Product size (bp): 317 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103329845 NCBI Gene Symbol: LOC103329845 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 4; peroxisomal Other designations: monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic |
Chromosome, Strand & Exon count | Chromosome: LG4 Strand: plus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024129.1 Gene Start and end within genomic accession: 20968397 ...... 20972173 |
CDS Sequence | 103329845 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (AAGGC)2 |
Repeat start & end within CDS | Repeat start: 1437 Repeat end: 1446 |
Forward primer | Primer sequence: CTATAGCCAAGGCCACGAGG Tm(°C): 59.966 GC (%): 60 Size: 20 |
Reverse primer | Primer sequence: CTTCTGCGCTTCCTTCCGTA Tm(°C): 60.109 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 1381 End: 1618 Product size (bp): 238 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103329845 NCBI Gene Symbol: LOC103329845 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 4; peroxisomal Other designations: monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic |
Chromosome, Strand & Exon count | Chromosome: LG4 Strand: plus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024129.1 Gene Start and end within genomic accession: 20968397 ...... 20972173 |
CDS Sequence | 103329845 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (TGCAT)2 |
Repeat start & end within CDS | Repeat start: 1539 Repeat end: 1548 |
Forward primer | Primer sequence: GTTGGAAAGGCAAGGCTTGG Tm(°C): 59.966 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CTTCTGCGCTTCCTTCCGTA Tm(°C): 60.109 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 1430 End: 1618 Product size (bp): 189 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103329845 NCBI Gene Symbol: LOC103329845 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 4; peroxisomal Other designations: monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic |
Chromosome, Strand & Exon count | Chromosome: LG4 Strand: plus Exon count: 7 |
Gene Location within genomic sequence | Genomic accession No. NC_024129.1 Gene Start and end within genomic accession: 20968397 ...... 20972173 |
CDS Sequence | 103329845 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: CCGTCCCAACACAAGCCTAT Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CCAAGCCTTGCCTTTCCAAC Tm(°C): 59.966 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 968 End: 1449 Product size (bp): 482 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103337588 NCBI Gene Symbol: LOC103337588 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 5; mitochondrial Other designations: monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: LG7 Strand: plus Exon count: 16 |
Gene Location within genomic sequence | Genomic accession No. NC_024132.1 Gene Start and end within genomic accession: 9409791 ...... 9413645 |
CDS Sequence | 103337588 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (TGG)3 |
Repeat start & end within CDS | Repeat start: 30 Repeat end: 38 |
Forward primer | Primer sequence: AACCGGGAGTGAGTTTGTGA Tm(°C): 59.165 GC (%): 50 Size: 20 |
Reverse primer | Primer sequence: CTCCCCACCAGATCCAACAC Tm(°C): 60.035 GC (%): 60 Size: 20 |
Primer start, end within sequence and product size | Start: 5 End: 227 Product size (bp): 223 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103337588 NCBI Gene Symbol: LOC103337588 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 5; mitochondrial Other designations: monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: LG7 Strand: plus Exon count: 16 |
Gene Location within genomic sequence | Genomic accession No. NC_024132.1 Gene Start and end within genomic accession: 9409791 ...... 9413645 |
CDS Sequence | 103337588 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (TGG)3 |
Repeat start & end within CDS | Repeat start: 498 Repeat end: 506 |
Forward primer | Primer sequence: GTGTTGGATCTGGTGGGGAG Tm(°C): 60.035 GC (%): 60 Size: 20 |
Reverse primer | Primer sequence: CTGCAGCAACCTCCATACCA Tm(°C): 60.035 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 208 End: 531 Product size (bp): 324 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103337588 NCBI Gene Symbol: LOC103337588 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 5; mitochondrial Other designations: monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: LG7 Strand: plus Exon count: 16 |
Gene Location within genomic sequence | Genomic accession No. NC_024132.1 Gene Start and end within genomic accession: 9409791 ...... 9413645 |
CDS Sequence | 103337588 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (TATTGG)2 |
Repeat start & end within CDS | Repeat start: 759 Repeat end: 770 |
Forward primer | Primer sequence: TGGTATGGAGGTTGCTGCAG Tm(°C): 60.035 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CGTCCGGAACAGACCATCAA Tm(°C): 60.038 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 512 End: 854 Product size (bp): 343 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103337588 NCBI Gene Symbol: LOC103337588 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase 5; mitochondrial Other designations: monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: LG7 Strand: plus Exon count: 16 |
Gene Location within genomic sequence | Genomic accession No. NC_024132.1 Gene Start and end within genomic accession: 9409791 ...... 9413645 |
CDS Sequence | 103337588 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: GTGTTGGATCTGGTGGGGAG Tm(°C): 60.035 GC (%): 60 Size: 20 |
Reverse primer | Primer sequence: CTGCAGCAACCTCCATACCA Tm(°C): 60.035 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 208 End: 531 Product size (bp): 324 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103326343 NCBI Gene Symbol: LOC103326343 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase; seedling isozyme-like Other designations: monodehydroascorbate reductase; seedling isozyme-like |
Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 1 |
Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 12360514 ...... 12362273 |
CDS Sequence | 103326343 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (TGG)3 |
Repeat start & end within CDS | Repeat start: 402 Repeat end: 410 |
Forward primer | Primer sequence: AGCCTCCCCTTCCGATTAGA Tm(°C): 59.735 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: GTTGGCCGTTCATAAGGTGC Tm(°C): 59.83 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 166 End: 514 Product size (bp): 349 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103326343 NCBI Gene Symbol: LOC103326343 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase; seedling isozyme-like Other designations: monodehydroascorbate reductase; seedling isozyme-like |
Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 1 |
Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 12360514 ...... 12362273 |
CDS Sequence | 103326343 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (GGA)3 |
Repeat start & end within CDS | Repeat start: 877 Repeat end: 885 |
Forward primer | Primer sequence: CCACCGGAAGAACCTTCGAA Tm(°C): 59.966 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: AGCTGCTCCGACTTCAAGAC Tm(°C): 60.038 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 691 End: 911 Product size (bp): 221 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103326343 NCBI Gene Symbol: LOC103326343 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase; seedling isozyme-like Other designations: monodehydroascorbate reductase; seedling isozyme-like |
Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 1 |
Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 12360514 ...... 12362273 |
CDS Sequence | 103326343 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (CAGTTG)2 |
Repeat start & end within CDS | Repeat start: 1046 Repeat end: 1057 |
Forward primer | Primer sequence: GTCTTGAAGTCGGAGCAGCT Tm(°C): 60.038 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: TTTGCCCCAACACCAACAAC Tm(°C): 59.749 GC (%): 50 Size: 20 |
Primer start, end within sequence and product size | Start: 892 End: 1153 Product size (bp): 262 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103326343 NCBI Gene Symbol: LOC103326343 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase; seedling isozyme-like Other designations: monodehydroascorbate reductase; seedling isozyme-like |
Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 1 |
Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 12360514 ...... 12362273 |
CDS Sequence | 103326343 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (TGTTGG)2 |
Repeat start & end within CDS | Repeat start: 1137 Repeat end: 1148 |
Forward primer | Primer sequence: TGCGTTCGATGCTGATACGA Tm(°C): 59.9 GC (%): 50 Size: 20 |
Reverse primer | Primer sequence: TAGCTTTCACGGCTTGCTCA Tm(°C): 59.965 GC (%): 50 Size: 20 |
Primer start, end within sequence and product size | Start: 1055 End: 1353 Product size (bp): 299 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103326343 NCBI Gene Symbol: LOC103326343 |
Gene Aliases | |
Gene description & Other designations | Description: monodehydroascorbate reductase; seedling isozyme-like Other designations: monodehydroascorbate reductase; seedling isozyme-like |
Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 1 |
Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 12360514 ...... 12362273 |
CDS Sequence | 103326343 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: TGAGCCTCCCCTTCCGATTA Tm(°C): 60.032 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: ACACAGACATGGAAGCCTGG Tm(°C): 59.963 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 164 End: 577 Product size (bp): 414 |
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