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Statistics

Number of enzymes: 1
Total Number of designed primers: 20
Number of PGTM primers:     4
Number of PMTM primers:     16

Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103339713     NCBI Gene Symbol: LOC103339713
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase      Other designations:   monodehydroascorbate reductase
Chromosome, Strand & Exon count Chromosome:   LG8     Strand:   minus     Exon count:   10
Gene Location within genomic sequence Genomic accession No. NC_024133.1      Gene Start and end within genomic accession: 8438743 ...... 8442406
CDS Sequence 103339713
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Di     Repeat sequence: (GA)4
Repeat start & end within CDS Repeat start: 221     Repeat end: 228
Forward primer Primer sequence:   CGGGAGTTTGCCAAACAAGG     Tm(°C): 59.968     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CCAGTGGCAATGACCAGAGT     Tm(°C): 59.963     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 63     End: 367     Product size (bp): 305
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103339713     NCBI Gene Symbol: LOC103339713
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase      Other designations:   monodehydroascorbate reductase
Chromosome, Strand & Exon count Chromosome:   LG8     Strand:   minus     Exon count:   10
Gene Location within genomic sequence Genomic accession No. NC_024133.1      Gene Start and end within genomic accession: 8438743 ...... 8442406
CDS Sequence 103339713
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (CAGTTG)2
Repeat start & end within CDS Repeat start: 677     Repeat end: 688
Forward primer Primer sequence:   TGCCTCGCCTTTTCACTTCT     Tm(°C): 59.891     GC (%): 50     Size: 20
Reverse primer Primer sequence:   GTCAGCTTCAAGCACAGTGC     Tm(°C): 60.041     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 595     End: 758     Product size (bp): 164
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103339713     NCBI Gene Symbol: LOC103339713
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase      Other designations:   monodehydroascorbate reductase
Chromosome, Strand & Exon count Chromosome:   LG8     Strand:   minus     Exon count:   10
Gene Location within genomic sequence Genomic accession No. NC_024133.1      Gene Start and end within genomic accession: 8438743 ...... 8442406
CDS Sequence 103339713
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TTG)4
Repeat start & end within CDS Repeat start: 761     Repeat end: 772
Forward primer Primer sequence:   GCACTGTGCTTGAAGCTGAC     Tm(°C): 60.041     GC (%): 55     Size: 20
Reverse primer Primer sequence:   ACGCATCCGTCTTAATGCCA     Tm(°C): 60.108     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 739     End: 849     Product size (bp): 111
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103339713     NCBI Gene Symbol: LOC103339713
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase      Other designations:   monodehydroascorbate reductase
Chromosome, Strand & Exon count Chromosome:   LG8     Strand:   minus     Exon count:   10
Gene Location within genomic sequence Genomic accession No. NC_024133.1      Gene Start and end within genomic accession: 8438743 ...... 8442406
CDS Sequence 103339713
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (CCTTC)2
Repeat start & end within CDS Repeat start: 1029     Repeat end: 1038
Forward primer Primer sequence:   CATGTTGACCATGCACGCAA     Tm(°C): 60.039     GC (%): 50     Size: 20
Reverse primer Primer sequence:   CCAGAAATGCTCCGACCACT     Tm(°C): 60.036     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 939     End: 1188     Product size (bp): 250
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103339713     NCBI Gene Symbol: LOC103339713
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase      Other designations:   monodehydroascorbate reductase
Chromosome, Strand & Exon count Chromosome:   LG8     Strand:   minus     Exon count:   10
Gene Location within genomic sequence Genomic accession No. NC_024133.1      Gene Start and end within genomic accession: 8438743 ...... 8442406
CDS Sequence 103339713
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   CGGGAGTTTGCCAAACAAGG     Tm(°C): 59.968     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CCAGTGGCAATGACCAGAGT     Tm(°C): 59.963     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 63     End: 367     Product size (bp): 305
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103329845     NCBI Gene Symbol: LOC103329845
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 4; peroxisomal      Other designations:   monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic
Chromosome, Strand & Exon count Chromosome:   LG4     Strand:   plus     Exon count:   7
Gene Location within genomic sequence Genomic accession No. NC_024129.1      Gene Start and end within genomic accession: 20968397 ...... 20972173
CDS Sequence 103329845
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (TCACAT)2
Repeat start & end within CDS Repeat start: 38     Repeat end: 49
Forward primer Primer sequence:   TCTGTCTGACATCACACGCG     Tm(°C): 60.387     GC (%): 55     Size: 20
Reverse primer Primer sequence:   TCTCCCCTCTTCCTTTGGGT     Tm(°C): 59.804     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 13     End: 167     Product size (bp): 155
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103329845     NCBI Gene Symbol: LOC103329845
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 4; peroxisomal      Other designations:   monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic
Chromosome, Strand & Exon count Chromosome:   LG4     Strand:   plus     Exon count:   7
Gene Location within genomic sequence Genomic accession No. NC_024129.1      Gene Start and end within genomic accession: 20968397 ...... 20972173
CDS Sequence 103329845
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Compound     Repeat sequence: (AC)4cacccaaaggaagaggg(GA)13
Repeat start & end within CDS Repeat start: 140     Repeat end: 190
Forward primer Primer sequence:   GCGCGTGTCACATTCACATT     Tm(°C): 60.11     GC (%): 50     Size: 20
Reverse primer Primer sequence:   CAGGTCTCTCATAAGGCGGC     Tm(°C): 60.25     GC (%): 60     Size: 20
Primer start, end within sequence and product size Start: 30     End: 330     Product size (bp): 301
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103329845     NCBI Gene Symbol: LOC103329845
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 4; peroxisomal      Other designations:   monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic
Chromosome, Strand & Exon count Chromosome:   LG4     Strand:   plus     Exon count:   7
Gene Location within genomic sequence Genomic accession No. NC_024129.1      Gene Start and end within genomic accession: 20968397 ...... 20972173
CDS Sequence 103329845
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TGG)3
Repeat start & end within CDS Repeat start: 693     Repeat end: 701
Forward primer Primer sequence:   TGGTGGGAATGCTGTTGTCA     Tm(°C): 59.815     GC (%): 50     Size: 20
Reverse primer Primer sequence:   ATAGGCTTGTGTTGGGACGG     Tm(°C): 60.035     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 671     End: 987     Product size (bp): 317
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103329845     NCBI Gene Symbol: LOC103329845
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 4; peroxisomal      Other designations:   monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic
Chromosome, Strand & Exon count Chromosome:   LG4     Strand:   plus     Exon count:   7
Gene Location within genomic sequence Genomic accession No. NC_024129.1      Gene Start and end within genomic accession: 20968397 ...... 20972173
CDS Sequence 103329845
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (AAGGC)2
Repeat start & end within CDS Repeat start: 1437     Repeat end: 1446
Forward primer Primer sequence:   CTATAGCCAAGGCCACGAGG     Tm(°C): 59.966     GC (%): 60     Size: 20
Reverse primer Primer sequence:   CTTCTGCGCTTCCTTCCGTA     Tm(°C): 60.109     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1381     End: 1618     Product size (bp): 238
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103329845     NCBI Gene Symbol: LOC103329845
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 4; peroxisomal      Other designations:   monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic
Chromosome, Strand & Exon count Chromosome:   LG4     Strand:   plus     Exon count:   7
Gene Location within genomic sequence Genomic accession No. NC_024129.1      Gene Start and end within genomic accession: 20968397 ...... 20972173
CDS Sequence 103329845
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (TGCAT)2
Repeat start & end within CDS Repeat start: 1539     Repeat end: 1548
Forward primer Primer sequence:   GTTGGAAAGGCAAGGCTTGG     Tm(°C): 59.966     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CTTCTGCGCTTCCTTCCGTA     Tm(°C): 60.109     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1430     End: 1618     Product size (bp): 189
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103329845     NCBI Gene Symbol: LOC103329845
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 4; peroxisomal      Other designations:   monodehydroascorbate reductase 4; peroxisomal|probable monodehydroascorbate reductase; cytoplasmic
Chromosome, Strand & Exon count Chromosome:   LG4     Strand:   plus     Exon count:   7
Gene Location within genomic sequence Genomic accession No. NC_024129.1      Gene Start and end within genomic accession: 20968397 ...... 20972173
CDS Sequence 103329845
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   CCGTCCCAACACAAGCCTAT     Tm(°C): 60.035     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CCAAGCCTTGCCTTTCCAAC     Tm(°C): 59.966     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 968     End: 1449     Product size (bp): 482
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103337588     NCBI Gene Symbol: LOC103337588
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 5; mitochondrial      Other designations:   monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   LG7     Strand:   plus     Exon count:   16
Gene Location within genomic sequence Genomic accession No. NC_024132.1      Gene Start and end within genomic accession: 9409791 ...... 9413645
CDS Sequence 103337588
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TGG)3
Repeat start & end within CDS Repeat start: 30     Repeat end: 38
Forward primer Primer sequence:   AACCGGGAGTGAGTTTGTGA     Tm(°C): 59.165     GC (%): 50     Size: 20
Reverse primer Primer sequence:   CTCCCCACCAGATCCAACAC     Tm(°C): 60.035     GC (%): 60     Size: 20
Primer start, end within sequence and product size Start: 5     End: 227     Product size (bp): 223
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103337588     NCBI Gene Symbol: LOC103337588
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 5; mitochondrial      Other designations:   monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   LG7     Strand:   plus     Exon count:   16
Gene Location within genomic sequence Genomic accession No. NC_024132.1      Gene Start and end within genomic accession: 9409791 ...... 9413645
CDS Sequence 103337588
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TGG)3
Repeat start & end within CDS Repeat start: 498     Repeat end: 506
Forward primer Primer sequence:   GTGTTGGATCTGGTGGGGAG     Tm(°C): 60.035     GC (%): 60     Size: 20
Reverse primer Primer sequence:   CTGCAGCAACCTCCATACCA     Tm(°C): 60.035     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 208     End: 531     Product size (bp): 324
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103337588     NCBI Gene Symbol: LOC103337588
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 5; mitochondrial      Other designations:   monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   LG7     Strand:   plus     Exon count:   16
Gene Location within genomic sequence Genomic accession No. NC_024132.1      Gene Start and end within genomic accession: 9409791 ...... 9413645
CDS Sequence 103337588
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (TATTGG)2
Repeat start & end within CDS Repeat start: 759     Repeat end: 770
Forward primer Primer sequence:   TGGTATGGAGGTTGCTGCAG     Tm(°C): 60.035     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CGTCCGGAACAGACCATCAA     Tm(°C): 60.038     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 512     End: 854     Product size (bp): 343
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103337588     NCBI Gene Symbol: LOC103337588
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase 5; mitochondrial      Other designations:   monodehydroascorbate reductase 5; mitochondrial|monodehydroascorbate reductase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   LG7     Strand:   plus     Exon count:   16
Gene Location within genomic sequence Genomic accession No. NC_024132.1      Gene Start and end within genomic accession: 9409791 ...... 9413645
CDS Sequence 103337588
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   GTGTTGGATCTGGTGGGGAG     Tm(°C): 60.035     GC (%): 60     Size: 20
Reverse primer Primer sequence:   CTGCAGCAACCTCCATACCA     Tm(°C): 60.035     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 208     End: 531     Product size (bp): 324
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103326343     NCBI Gene Symbol: LOC103326343
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase; seedling isozyme-like      Other designations:   monodehydroascorbate reductase; seedling isozyme-like
Chromosome, Strand & Exon count Chromosome:   LG3     Strand:   minus     Exon count:   1
Gene Location within genomic sequence Genomic accession No. NC_024128.1      Gene Start and end within genomic accession: 12360514 ...... 12362273
CDS Sequence 103326343
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TGG)3
Repeat start & end within CDS Repeat start: 402     Repeat end: 410
Forward primer Primer sequence:   AGCCTCCCCTTCCGATTAGA     Tm(°C): 59.735     GC (%): 55     Size: 20
Reverse primer Primer sequence:   GTTGGCCGTTCATAAGGTGC     Tm(°C): 59.83     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 166     End: 514     Product size (bp): 349
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103326343     NCBI Gene Symbol: LOC103326343
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase; seedling isozyme-like      Other designations:   monodehydroascorbate reductase; seedling isozyme-like
Chromosome, Strand & Exon count Chromosome:   LG3     Strand:   minus     Exon count:   1
Gene Location within genomic sequence Genomic accession No. NC_024128.1      Gene Start and end within genomic accession: 12360514 ...... 12362273
CDS Sequence 103326343
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (GGA)3
Repeat start & end within CDS Repeat start: 877     Repeat end: 885
Forward primer Primer sequence:   CCACCGGAAGAACCTTCGAA     Tm(°C): 59.966     GC (%): 55     Size: 20
Reverse primer Primer sequence:   AGCTGCTCCGACTTCAAGAC     Tm(°C): 60.038     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 691     End: 911     Product size (bp): 221
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103326343     NCBI Gene Symbol: LOC103326343
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase; seedling isozyme-like      Other designations:   monodehydroascorbate reductase; seedling isozyme-like
Chromosome, Strand & Exon count Chromosome:   LG3     Strand:   minus     Exon count:   1
Gene Location within genomic sequence Genomic accession No. NC_024128.1      Gene Start and end within genomic accession: 12360514 ...... 12362273
CDS Sequence 103326343
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (CAGTTG)2
Repeat start & end within CDS Repeat start: 1046     Repeat end: 1057
Forward primer Primer sequence:   GTCTTGAAGTCGGAGCAGCT     Tm(°C): 60.038     GC (%): 55     Size: 20
Reverse primer Primer sequence:   TTTGCCCCAACACCAACAAC     Tm(°C): 59.749     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 892     End: 1153     Product size (bp): 262
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103326343     NCBI Gene Symbol: LOC103326343
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase; seedling isozyme-like      Other designations:   monodehydroascorbate reductase; seedling isozyme-like
Chromosome, Strand & Exon count Chromosome:   LG3     Strand:   minus     Exon count:   1
Gene Location within genomic sequence Genomic accession No. NC_024128.1      Gene Start and end within genomic accession: 12360514 ...... 12362273
CDS Sequence 103326343
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (TGTTGG)2
Repeat start & end within CDS Repeat start: 1137     Repeat end: 1148
Forward primer Primer sequence:   TGCGTTCGATGCTGATACGA     Tm(°C): 59.9     GC (%): 50     Size: 20
Reverse primer Primer sequence:   TAGCTTTCACGGCTTGCTCA     Tm(°C): 59.965     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 1055     End: 1353     Product size (bp): 299
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Enzyme Id:  K08232

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103326343     NCBI Gene Symbol: LOC103326343
Gene Aliases
Gene description & Other designations Description:   monodehydroascorbate reductase; seedling isozyme-like      Other designations:   monodehydroascorbate reductase; seedling isozyme-like
Chromosome, Strand & Exon count Chromosome:   LG3     Strand:   minus     Exon count:   1
Gene Location within genomic sequence Genomic accession No. NC_024128.1      Gene Start and end within genomic accession: 12360514 ...... 12362273
CDS Sequence 103326343
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   TGAGCCTCCCCTTCCGATTA     Tm(°C): 60.032     GC (%): 55     Size: 20
Reverse primer Primer sequence:   ACACAGACATGGAAGCCTGG     Tm(°C): 59.963     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 164     End: 577     Product size (bp): 414
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