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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 18668096 NCBI Gene Symbol: ndhA |
| Gene Aliases | CP95_p010 |
| Gene description & Other designations | Description: NADH-plastoquinone oxidoreductase subunit 1 Other designations: |
| Chromosome, Strand & Exon count | Chromosome: Strand: minus Exon count: 0 |
| Gene Location within genomic sequence | Genomic accession No. NC_023798.1 Gene Start and end within genomic accession: 122522 ...... 124751 |
| CDS Sequence | 18668096 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Compound Repeat sequence: (AGA)3attagtagcaggttatcaaaccgaatactcgggtataaaatttgg(TTT
AT)2 |
| Repeat start & end within CDS | Repeat start: 708 Repeat end: 771 |
| Forward primer | Primer sequence: GGGATGGAATTTGTGGCGTC Tm(°C): 59.544 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: ACCGATTGTCGCTCCAAAAAC Tm(°C): 59.734 GC (%): 47.619 Size: 21 |
| Primer start, end within sequence and product size | Start: 611 End: 917 Product size (bp): 307 |
| JBrowse View | JBrowse |
|
| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 18668096 NCBI Gene Symbol: ndhA |
| Gene Aliases | CP95_p010 |
| Gene description & Other designations | Description: NADH-plastoquinone oxidoreductase subunit 1 Other designations: |
| Chromosome, Strand & Exon count | Chromosome: Strand: minus Exon count: 0 |
| Gene Location within genomic sequence | Genomic accession No. NC_023798.1 Gene Start and end within genomic accession: 122522 ...... 124751 |
| CDS Sequence | 18668096 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Hexa Repeat sequence: (TTGTTC)2 |
| Repeat start & end within CDS | Repeat start: 946 Repeat end: 957 |
| Forward primer | Primer sequence: GTGGAGTTTTTGGAGCGACA Tm(°C): 58.695 GC (%): 50 Size: 20 |
| Reverse primer | Primer sequence: TGGTCCATTCTTAGCCTTGGT Tm(°C): 59.007 GC (%): 47.619 Size: 21 |
| Primer start, end within sequence and product size | Start: 892 End: 1003 Product size (bp): 112 |
| JBrowse View | JBrowse |
|
| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 18668096 NCBI Gene Symbol: ndhA |
| Gene Aliases | CP95_p010 |
| Gene description & Other designations | Description: NADH-plastoquinone oxidoreductase subunit 1 Other designations: |
| Chromosome, Strand & Exon count | Chromosome: Strand: minus Exon count: 0 |
| Gene Location within genomic sequence | Genomic accession No. NC_023798.1 Gene Start and end within genomic accession: 122522 ...... 124751 |
| CDS Sequence | 18668096 |
| Marker Information | |
| Marker Type | PGTM |
| Repeat type & sequence | Repeat type: Repeat sequence: |
| Repeat start & end within CDS | Repeat start: Repeat end: |
| Forward primer | Primer sequence: ATTGGACCTGAATACGCCGG Tm(°C): 60.179 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: AGCAGCTCGTAGACCACCTA Tm(°C): 60.034 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 183 End: 494 Product size (bp): 312 |
| JBrowse View | JBrowse |
