Statistics
Number of enzymes: 1
Total Number of designed primers: 4
Number of PGTM primers: 1
Number of PMTM primers: 3
|
| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 101261158 NCBI Gene Symbol: LOC101261158 |
| Gene Aliases | |
| Gene description & Other designations | Description: siroheme synthase Other designations: uncharacterized protein LOC101261158|uroporphyrinogen-III C-methyltransferase |
| Chromosome, Strand & Exon count | Chromosome: 1 Strand: minus Exon count: 5 |
| Gene Location within genomic sequence | Genomic accession No. NC_015438.3 Gene Start and end within genomic accession: 81498629 ...... 81502940 |
| CDS Sequence | 101261158 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Compound Repeat sequence: (TCT)3ggagcaacccaattgacaa(AAATC)2tttttgtgttaatcctgtttgc
tgtattaactatg(CAT)3(CTT)3 |
| Repeat start & end within CDS | Repeat start: 34 Repeat end: 124 |
| Forward primer | Primer sequence: TGGCTCTTGTGAGTAGAATTCC Tm(°C): 57.792 GC (%): 45.455 Size: 22 |
| Reverse primer | Primer sequence: TCAGGCAGCTGCAAAGCTAT Tm(°C): 60.035 GC (%): 50 Size: 20 |
| Primer start, end within sequence and product size | Start: 1 End: 271 Product size (bp): 271 |
| JBrowse View | JBrowse |
|
| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 101261158 NCBI Gene Symbol: LOC101261158 |
| Gene Aliases | |
| Gene description & Other designations | Description: siroheme synthase Other designations: uncharacterized protein LOC101261158|uroporphyrinogen-III C-methyltransferase |
| Chromosome, Strand & Exon count | Chromosome: 1 Strand: minus Exon count: 5 |
| Gene Location within genomic sequence | Genomic accession No. NC_015438.3 Gene Start and end within genomic accession: 81498629 ...... 81502940 |
| CDS Sequence | 101261158 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Penta Repeat sequence: (CTGAA)2 |
| Repeat start & end within CDS | Repeat start: 269 Repeat end: 278 |
| Forward primer | Primer sequence: TCTGGAGCAACCCAATTGACA Tm(°C): 59.855 GC (%): 47.619 Size: 21 |
| Reverse primer | Primer sequence: ACCCTCCTTCCCCTTCTCTC Tm(°C): 59.957 GC (%): 60 Size: 20 |
| Primer start, end within sequence and product size | Start: 39 End: 324 Product size (bp): 286 |
| JBrowse View | JBrowse |
|
| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 101261158 NCBI Gene Symbol: LOC101261158 |
| Gene Aliases | |
| Gene description & Other designations | Description: siroheme synthase Other designations: uncharacterized protein LOC101261158|uroporphyrinogen-III C-methyltransferase |
| Chromosome, Strand & Exon count | Chromosome: 1 Strand: minus Exon count: 5 |
| Gene Location within genomic sequence | Genomic accession No. NC_015438.3 Gene Start and end within genomic accession: 81498629 ...... 81502940 |
| CDS Sequence | 101261158 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Compound Repeat sequence: (GAG)3aagagatggattttctccaacaaaagggaattc(AAGTTA)2 |
| Repeat start & end within CDS | Repeat start: 623 Repeat end: 676 |
| Forward primer | Primer sequence: CTGGGGCCAATGTTGTGAGA Tm(°C): 60.251 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: CTCCGCCGATATCCCAGATG Tm(°C): 59.826 GC (%): 60 Size: 20 |
| Primer start, end within sequence and product size | Start: 571 End: 713 Product size (bp): 143 |
| JBrowse View | JBrowse |
|
| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 101261158 NCBI Gene Symbol: LOC101261158 |
| Gene Aliases | |
| Gene description & Other designations | Description: siroheme synthase Other designations: uncharacterized protein LOC101261158|uroporphyrinogen-III C-methyltransferase |
| Chromosome, Strand & Exon count | Chromosome: 1 Strand: minus Exon count: 5 |
| Gene Location within genomic sequence | Genomic accession No. NC_015438.3 Gene Start and end within genomic accession: 81498629 ...... 81502940 |
| CDS Sequence | 101261158 |
| Marker Information | |
| Marker Type | PGTM |
| Repeat type & sequence | Repeat type: Repeat sequence: |
| Repeat start & end within CDS | Repeat start: Repeat end: |
| Forward primer | Primer sequence: CAACGCATGGTGTTTGCAGA Tm(°C): 59.969 GC (%): 50 Size: 20 |
| Reverse primer | Primer sequence: CTTCAGTGGAGTGTGGCCAT Tm(°C): 59.963 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 951 End: 1080 Product size (bp): 130 |
| JBrowse View | JBrowse |
