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Statistics

Number of enzymes: 1
Total Number of designed primers: 7
Number of PGTM primers:     1
Number of PMTM primers:     6

Enzyme Id:  K00284

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103341391     NCBI Gene Symbol: LOC103341391
Gene Aliases
Gene description & Other designations Description:   ferredoxin-dependent glutamate synthase; chloroplastic      Other designations:   ferredoxin-dependent glutamate synthase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   Un     Strand:        Exon count:   
Gene Location within genomic sequence Genomic accession No.      Gene Start and end within genomic accession: ......
CDS Sequence 103341391
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TCG)3
Repeat start & end within CDS Repeat start: 92     Repeat end: 100
Forward primer Primer sequence:   TGCAGTCATTGGCTCCGATT     Tm(°C): 60.035     GC (%): 50     Size: 20
Reverse primer Primer sequence:   CAAAGCAGCATCGCTACGTC     Tm(°C): 59.974     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 7     End: 239     Product size (bp): 233
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Enzyme Id:  K00284

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103341391     NCBI Gene Symbol: LOC103341391
Gene Aliases
Gene description & Other designations Description:   ferredoxin-dependent glutamate synthase; chloroplastic      Other designations:   ferredoxin-dependent glutamate synthase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   Un     Strand:        Exon count:   
Gene Location within genomic sequence Genomic accession No.      Gene Start and end within genomic accession: ......
CDS Sequence 103341391
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (TTTAT)2
Repeat start & end within CDS Repeat start: 891     Repeat end: 900
Forward primer Primer sequence:   TACAAGGGAATGCTCCGCTC     Tm(°C): 59.822     GC (%): 55     Size: 20
Reverse primer Primer sequence:   TGCAGAGTCAGATGCCTTCG     Tm(°C): 60.108     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 858     End: 1148     Product size (bp): 291
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Enzyme Id:  K00284

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103341391     NCBI Gene Symbol: LOC103341391
Gene Aliases
Gene description & Other designations Description:   ferredoxin-dependent glutamate synthase; chloroplastic      Other designations:   ferredoxin-dependent glutamate synthase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   Un     Strand:        Exon count:   
Gene Location within genomic sequence Genomic accession No.      Gene Start and end within genomic accession: ......
CDS Sequence 103341391
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (ACTTG)2
Repeat start & end within CDS Repeat start: 1983     Repeat end: 1992
Forward primer Primer sequence:   CCTGTGCTGAATGAAGGGGA     Tm(°C): 59.671     GC (%): 55     Size: 20
Reverse primer Primer sequence:   ACCGATCAGAGAGCACAAGC     Tm(°C): 60.108     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1962     End: 2151     Product size (bp): 190
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Enzyme Id:  K00284

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103341391     NCBI Gene Symbol: LOC103341391
Gene Aliases
Gene description & Other designations Description:   ferredoxin-dependent glutamate synthase; chloroplastic      Other designations:   ferredoxin-dependent glutamate synthase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   Un     Strand:        Exon count:   
Gene Location within genomic sequence Genomic accession No.      Gene Start and end within genomic accession: ......
CDS Sequence 103341391
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (AAAATG)2
Repeat start & end within CDS Repeat start: 2774     Repeat end: 2785
Forward primer Primer sequence:   GCTCCACAAAGCTATTCGCC     Tm(°C): 59.621     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CGAATAGGATCCTCGCCACC     Tm(°C): 60.038     GC (%): 60     Size: 20
Primer start, end within sequence and product size Start: 2750     End: 3037     Product size (bp): 288
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Enzyme Id:  K00284

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103341391     NCBI Gene Symbol: LOC103341391
Gene Aliases
Gene description & Other designations Description:   ferredoxin-dependent glutamate synthase; chloroplastic      Other designations:   ferredoxin-dependent glutamate synthase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   Un     Strand:        Exon count:   
Gene Location within genomic sequence Genomic accession No.      Gene Start and end within genomic accession: ......
CDS Sequence 103341391
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (GAATA)2
Repeat start & end within CDS Repeat start: 2985     Repeat end: 2994
Forward primer Primer sequence:   GTGCTCCAATTCCTGTGGGA     Tm(°C): 59.962     GC (%): 55     Size: 20
Reverse primer Primer sequence:   AGCTGATCGGCATTGACCAA     Tm(°C): 60.035     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 2863     End: 3193     Product size (bp): 331
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Enzyme Id:  K00284

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103341391     NCBI Gene Symbol: LOC103341391
Gene Aliases
Gene description & Other designations Description:   ferredoxin-dependent glutamate synthase; chloroplastic      Other designations:   ferredoxin-dependent glutamate synthase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   Un     Strand:        Exon count:   
Gene Location within genomic sequence Genomic accession No.      Gene Start and end within genomic accession: ......
CDS Sequence 103341391
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Hexa     Repeat sequence: (CTCCAC)2
Repeat start & end within CDS Repeat start: 3311     Repeat end: 3322
Forward primer Primer sequence:   CAAAATTGCCCAAGGTGCGA     Tm(°C): 59.967     GC (%): 50     Size: 20
Reverse primer Primer sequence:   CCCTTTGCAACACCAGAAGC     Tm(°C): 59.967     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 3200     End: 3457     Product size (bp): 258
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Enzyme Id:  K00284

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103341391     NCBI Gene Symbol: LOC103341391
Gene Aliases
Gene description & Other designations Description:   ferredoxin-dependent glutamate synthase; chloroplastic      Other designations:   ferredoxin-dependent glutamate synthase; chloroplastic
Chromosome, Strand & Exon count Chromosome:   Un     Strand:        Exon count:   
Gene Location within genomic sequence Genomic accession No.      Gene Start and end within genomic accession: ......
CDS Sequence 103341391
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   GACGTAGCGATGCTGCTTTG     Tm(°C): 59.974     GC (%): 55     Size: 20
Reverse primer Primer sequence:   TCCAACACCAGTGTGCAACT     Tm(°C): 60.035     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 220     End: 545     Product size (bp): 326
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