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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103341391 NCBI Gene Symbol: LOC103341391 |
Gene Aliases | |
Gene description & Other designations | Description: ferredoxin-dependent glutamate synthase; chloroplastic Other designations: ferredoxin-dependent glutamate synthase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: Un Strand: Exon count: |
Gene Location within genomic sequence | Genomic accession No. Gene Start and end within genomic accession: ...... |
CDS Sequence | 103341391 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (ACTTG)2 |
Repeat start & end within CDS | Repeat start: 1983 Repeat end: 1992 |
Forward primer | Primer sequence: CCTGTGCTGAATGAAGGGGA Tm(°C): 59.671 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: ACCGATCAGAGAGCACAAGC Tm(°C): 60.108 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 1962 End: 2151 Product size (bp): 190 |
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|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103341391 NCBI Gene Symbol: LOC103341391 |
Gene Aliases | |
Gene description & Other designations | Description: ferredoxin-dependent glutamate synthase; chloroplastic Other designations: ferredoxin-dependent glutamate synthase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: Un Strand: Exon count: |
Gene Location within genomic sequence | Genomic accession No. Gene Start and end within genomic accession: ...... |
CDS Sequence | 103341391 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (AAAATG)2 |
Repeat start & end within CDS | Repeat start: 2774 Repeat end: 2785 |
Forward primer | Primer sequence: GCTCCACAAAGCTATTCGCC Tm(°C): 59.621 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: CGAATAGGATCCTCGCCACC Tm(°C): 60.038 GC (%): 60 Size: 20 |
Primer start, end within sequence and product size | Start: 2750 End: 3037 Product size (bp): 288 |
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|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103341391 NCBI Gene Symbol: LOC103341391 |
Gene Aliases | |
Gene description & Other designations | Description: ferredoxin-dependent glutamate synthase; chloroplastic Other designations: ferredoxin-dependent glutamate synthase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: Un Strand: Exon count: |
Gene Location within genomic sequence | Genomic accession No. Gene Start and end within genomic accession: ...... |
CDS Sequence | 103341391 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (GAATA)2 |
Repeat start & end within CDS | Repeat start: 2985 Repeat end: 2994 |
Forward primer | Primer sequence: GTGCTCCAATTCCTGTGGGA Tm(°C): 59.962 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: AGCTGATCGGCATTGACCAA Tm(°C): 60.035 GC (%): 50 Size: 20 |
Primer start, end within sequence and product size | Start: 2863 End: 3193 Product size (bp): 331 |
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|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103341391 NCBI Gene Symbol: LOC103341391 |
Gene Aliases | |
Gene description & Other designations | Description: ferredoxin-dependent glutamate synthase; chloroplastic Other designations: ferredoxin-dependent glutamate synthase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: Un Strand: Exon count: |
Gene Location within genomic sequence | Genomic accession No. Gene Start and end within genomic accession: ...... |
CDS Sequence | 103341391 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (CTCCAC)2 |
Repeat start & end within CDS | Repeat start: 3311 Repeat end: 3322 |
Forward primer | Primer sequence: CAAAATTGCCCAAGGTGCGA Tm(°C): 59.967 GC (%): 50 Size: 20 |
Reverse primer | Primer sequence: CCCTTTGCAACACCAGAAGC Tm(°C): 59.967 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 3200 End: 3457 Product size (bp): 258 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103341391 NCBI Gene Symbol: LOC103341391 |
Gene Aliases | |
Gene description & Other designations | Description: ferredoxin-dependent glutamate synthase; chloroplastic Other designations: ferredoxin-dependent glutamate synthase; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: Un Strand: Exon count: |
Gene Location within genomic sequence | Genomic accession No. Gene Start and end within genomic accession: ...... |
CDS Sequence | 103341391 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: GACGTAGCGATGCTGCTTTG Tm(°C): 59.974 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: TCCAACACCAGTGTGCAACT Tm(°C): 60.035 GC (%): 50 Size: 20 |
Primer start, end within sequence and product size | Start: 220 End: 545 Product size (bp): 326 |
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