Statistics
Number of enzymes: 1
Total Number of designed primers: 6
Number of PGTM primers: 1
Number of PMTM primers: 5
Number of Failed designed PMTM primers: 1
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103339235 NCBI Gene Symbol: LOC103339235 |
Gene Aliases | |
Gene description & Other designations | Description: L-galactono-1;4-lactone dehydrogenase; mitochondrial Other designations: L-galactono-1;4-lactone dehydrogenase; mitochondrial |
Chromosome, Strand & Exon count | Chromosome: LG8 Strand: plus Exon count: 6 |
Gene Location within genomic sequence | Genomic accession No. NC_024133.1 Gene Start and end within genomic accession: 4410592 ...... 4415719 |
CDS Sequence | 103339235 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (TTCCCT)2 |
Repeat start & end within CDS | Repeat start: 229 Repeat end: 240 |
Forward primer | Primer sequence: TGCAGCCACCTACTACTCCT Tm(°C): 59.959 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: ACCCTTATCCCAGCTTGCAC Tm(°C): 60.034 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 209 End: 556 Product size (bp): 348 |
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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103339235 NCBI Gene Symbol: LOC103339235 |
Gene Aliases | |
Gene description & Other designations | Description: L-galactono-1;4-lactone dehydrogenase; mitochondrial Other designations: L-galactono-1;4-lactone dehydrogenase; mitochondrial |
Chromosome, Strand & Exon count | Chromosome: LG8 Strand: plus Exon count: 6 |
Gene Location within genomic sequence | Genomic accession No. NC_024133.1 Gene Start and end within genomic accession: 4410592 ...... 4415719 |
CDS Sequence | 103339235 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (GGATT)2 |
Repeat start & end within CDS | Repeat start: 452 Repeat end: 461 |
Forward primer | Primer sequence: TGCAGCCACCTACTACTCCT Tm(°C): 59.959 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: ACCCTTATCCCAGCTTGCAC Tm(°C): 60.034 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 209 End: 556 Product size (bp): 348 |
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|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103339235 NCBI Gene Symbol: LOC103339235 |
Gene Aliases | |
Gene description & Other designations | Description: L-galactono-1;4-lactone dehydrogenase; mitochondrial Other designations: L-galactono-1;4-lactone dehydrogenase; mitochondrial |
Chromosome, Strand & Exon count | Chromosome: LG8 Strand: plus Exon count: 6 |
Gene Location within genomic sequence | Genomic accession No. NC_024133.1 Gene Start and end within genomic accession: 4410592 ...... 4415719 |
CDS Sequence | 103339235 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (AGA)3 |
Repeat start & end within CDS | Repeat start: 521 Repeat end: 529 |
Forward primer | Primer sequence: TGCAGCCACCTACTACTCCT Tm(°C): 59.959 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: ACCCTTATCCCAGCTTGCAC Tm(°C): 60.034 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 209 End: 556 Product size (bp): 348 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103339235 NCBI Gene Symbol: LOC103339235 |
Gene Aliases | |
Gene description & Other designations | Description: L-galactono-1;4-lactone dehydrogenase; mitochondrial Other designations: L-galactono-1;4-lactone dehydrogenase; mitochondrial |
Chromosome, Strand & Exon count | Chromosome: LG8 Strand: plus Exon count: 6 |
Gene Location within genomic sequence | Genomic accession No. NC_024133.1 Gene Start and end within genomic accession: 4410592 ...... 4415719 |
CDS Sequence | 103339235 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (GTTGTG)2 |
Repeat start & end within CDS | Repeat start: 958 Repeat end: 969 |
Forward primer | Primer sequence: ACCATCCAGTGCGTTGAGAG Tm(°C): 60.037 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: GCACTTCTGGAGGCATTCCT Tm(°C): 60.035 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 819 End: 1082 Product size (bp): 264 |
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|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103339235 NCBI Gene Symbol: LOC103339235 |
Gene Aliases | |
Gene description & Other designations | Description: L-galactono-1;4-lactone dehydrogenase; mitochondrial Other designations: L-galactono-1;4-lactone dehydrogenase; mitochondrial |
Chromosome, Strand & Exon count | Chromosome: LG8 Strand: plus Exon count: 6 |
Gene Location within genomic sequence | Genomic accession No. NC_024133.1 Gene Start and end within genomic accession: 4410592 ...... 4415719 |
CDS Sequence | 103339235 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (CCAGG)2 |
Repeat start & end within CDS | Repeat start: 1662 Repeat end: 1671 |
Forward primer | Primer sequence: AAAGAAGAGCTTGCCTCGCT Tm(°C): 59.964 GC (%): 50 Size: 20 |
Reverse primer | Primer sequence: GAAAGGATCCTGCTCGGGTC Tm(°C): 60.179 GC (%): 60 Size: 20 |
Primer start, end within sequence and product size | Start: 1641 End: 1741 Product size (bp): 101 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103339235 NCBI Gene Symbol: LOC103339235 |
Gene Aliases | |
Gene description & Other designations | Description: L-galactono-1;4-lactone dehydrogenase; mitochondrial Other designations: L-galactono-1;4-lactone dehydrogenase; mitochondrial |
Chromosome, Strand & Exon count | Chromosome: LG8 Strand: plus Exon count: 6 |
Gene Location within genomic sequence | Genomic accession No. NC_024133.1 Gene Start and end within genomic accession: 4410592 ...... 4415719 |
CDS Sequence | 103339235 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Hexa Repeat sequence: (CTCTCA)2 |
Repeat start & end within CDS | Repeat start: 11 Repeat end: 22 |
Forward primer | Primer sequence: None Tm(°C): GC (%): Size: |
Reverse primer | Primer sequence: None Tm(°C): GC (%): Size: |
Primer start, end within sequence and product size | Start: End: Product size (bp): |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103339235 NCBI Gene Symbol: LOC103339235 |
Gene Aliases | |
Gene description & Other designations | Description: L-galactono-1;4-lactone dehydrogenase; mitochondrial Other designations: L-galactono-1;4-lactone dehydrogenase; mitochondrial |
Chromosome, Strand & Exon count | Chromosome: LG8 Strand: plus Exon count: 6 |
Gene Location within genomic sequence | Genomic accession No. NC_024133.1 Gene Start and end within genomic accession: 4410592 ...... 4415719 |
CDS Sequence | 103339235 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: CACAGCCCTCGTCTTGTTCT Tm(°C): 59.966 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: TCCCATCCACCAATTCCTGC Tm(°C): 60.033 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 185 End: 576 Product size (bp): 392 |
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