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Statistics

Number of enzymes: 1
Total Number of designed primers: 8
Number of PGTM primers:     2
Number of PMTM primers:     6

Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103332140     NCBI Gene Symbol: LOC103332140
Gene Aliases
Gene description & Other designations Description:   probable L-gulonolactone oxidase 6      Other designations:   probable L-gulonolactone oxidase 6
Chromosome, Strand & Exon count Chromosome:   LG5     Strand:   plus     Exon count:   4
Gene Location within genomic sequence Genomic accession No. NC_024130.1      Gene Start and end within genomic accession: 17418149 ...... 17420919
CDS Sequence 103332140
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (GCCTT)2
Repeat start & end within CDS Repeat start: 457     Repeat end: 466
Forward primer Primer sequence:   GAGTGGGGTGACTCTCAAGC     Tm(°C): 60.037     GC (%): 60     Size: 20
Reverse primer Primer sequence:   AATGGTCAAGCCCCACCAAT     Tm(°C): 59.883     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 404     End: 494     Product size (bp): 91
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Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103332140     NCBI Gene Symbol: LOC103332140
Gene Aliases
Gene description & Other designations Description:   probable L-gulonolactone oxidase 6      Other designations:   probable L-gulonolactone oxidase 6
Chromosome, Strand & Exon count Chromosome:   LG5     Strand:   plus     Exon count:   4
Gene Location within genomic sequence Genomic accession No. NC_024130.1      Gene Start and end within genomic accession: 17418149 ...... 17420919
CDS Sequence 103332140
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (GGGTG)2
Repeat start & end within CDS Repeat start: 1617     Repeat end: 1626
Forward primer Primer sequence:   AAAGTACAAGCGCGCCAAAG     Tm(°C): 60.04     GC (%): 50     Size: 20
Reverse primer Primer sequence:   GCTAGGGGCACAATGGATGT     Tm(°C): 60.107     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1517     End: 1697     Product size (bp): 181
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Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103332140     NCBI Gene Symbol: LOC103332140
Gene Aliases
Gene description & Other designations Description:   probable L-gulonolactone oxidase 6      Other designations:   probable L-gulonolactone oxidase 6
Chromosome, Strand & Exon count Chromosome:   LG5     Strand:   plus     Exon count:   4
Gene Location within genomic sequence Genomic accession No. NC_024130.1      Gene Start and end within genomic accession: 17418149 ...... 17420919
CDS Sequence 103332140
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   TCAGAACCGCCTTCAAGCAT     Tm(°C): 59.963     GC (%): 50     Size: 20
Reverse primer Primer sequence:   TGGGTTCAATCTCCACCAGC     Tm(°C): 59.962     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1088     End: 1269     Product size (bp): 182
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Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103320196     NCBI Gene Symbol: LOC103320196
Gene Aliases
Gene description & Other designations Description:   L-gulonolactone oxidase 3      Other designations:   L-gulonolactone oxidase 3
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   3
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 9398565 ...... 9401016
CDS Sequence 103320196
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Compound     Repeat sequence: (TCAAAG)2ttgtgagccaattttctcacaccatccccaagctgg(CCTGC)2
Repeat start & end within CDS Repeat start: 242     Repeat end: 299
Forward primer Primer sequence:   CCAACAACCGAAGAGGAGCT     Tm(°C): 59.965     GC (%): 55     Size: 20
Reverse primer Primer sequence:   TTTTCCCCACCATGAGCTCC     Tm(°C): 59.96     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 186     End: 527     Product size (bp): 342
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Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103320196     NCBI Gene Symbol: LOC103320196
Gene Aliases
Gene description & Other designations Description:   L-gulonolactone oxidase 3      Other designations:   L-gulonolactone oxidase 3
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   3
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 9398565 ...... 9401016
CDS Sequence 103320196
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Penta     Repeat sequence: (TCCAA)2
Repeat start & end within CDS Repeat start: 893     Repeat end: 902
Forward primer Primer sequence:   GCCTCAGGCGATGGAACATA     Tm(°C): 59.893     GC (%): 55     Size: 20
Reverse primer Primer sequence:   ATGAGTTGTCTGCGGCTGTT     Tm(°C): 60.25     GC (%): 50     Size: 20
Primer start, end within sequence and product size Start: 858     End: 1128     Product size (bp): 271
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Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103320196     NCBI Gene Symbol: LOC103320196
Gene Aliases
Gene description & Other designations Description:   L-gulonolactone oxidase 3      Other designations:   L-gulonolactone oxidase 3
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   3
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 9398565 ...... 9401016
CDS Sequence 103320196
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Tri     Repeat sequence: (TCT)3
Repeat start & end within CDS Repeat start: 1157     Repeat end: 1165
Forward primer Primer sequence:   GTAATTGGTCCCCAGGGCAA     Tm(°C): 59.96     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CAACGACCACGGAGTCTTCA     Tm(°C): 59.968     GC (%): 55     Size: 20
Primer start, end within sequence and product size Start: 1059     End: 1344     Product size (bp): 286
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Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103320196     NCBI Gene Symbol: LOC103320196
Gene Aliases
Gene description & Other designations Description:   L-gulonolactone oxidase 3      Other designations:   L-gulonolactone oxidase 3
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   3
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 9398565 ...... 9401016
CDS Sequence 103320196
Marker Information
Marker Type PMTM
Repeat type & sequence Repeat type: Compound     Repeat sequence: (TCA)3c(CACCAT)2
Repeat start & end within CDS Repeat start: 1726     Repeat end: 1747
Forward primer Primer sequence:   GGTGTGAAGGGAGATGGGTG     Tm(°C): 60.035     GC (%): 60     Size: 20
Reverse primer Primer sequence:   TCACTACCTGATCCCACAGAG     Tm(°C): 58.26     GC (%): 52.381     Size: 21
Primer start, end within sequence and product size Start: 1596     End: 1768     Product size (bp): 173
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Enzyme Id:  K00103

Gene Information
NCBI Gene Accession Number & Symbol Accession Number:   103320196     NCBI Gene Symbol: LOC103320196
Gene Aliases
Gene description & Other designations Description:   L-gulonolactone oxidase 3      Other designations:   L-gulonolactone oxidase 3
Chromosome, Strand & Exon count Chromosome:   LG2     Strand:   minus     Exon count:   3
Gene Location within genomic sequence Genomic accession No. NC_024127.1      Gene Start and end within genomic accession: 9398565 ...... 9401016
CDS Sequence 103320196
Marker Information
Marker Type PGTM
Repeat type & sequence Repeat type:      Repeat sequence:
Repeat start & end within CDS Repeat start:      Repeat end:
Forward primer Primer sequence:   TGAAGACTCCGTGGTCGTTG     Tm(°C): 59.968     GC (%): 55     Size: 20
Reverse primer Primer sequence:   CACCCATCTCCCTTCACACC     Tm(°C): 60.035     GC (%): 60     Size: 20
Primer start, end within sequence and product size Start: 1325     End: 1615     Product size (bp): 291
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