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| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103331480 NCBI Gene Symbol: LOC103331480 |
Gene Aliases | |
Gene description & Other designations | Description: malate dehydrogenase [NADP]; chloroplastic Other designations: malate dehydrogenase [NADP]; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: LG5 Strand: minus Exon count: 14 |
Gene Location within genomic sequence | Genomic accession No. NC_024130.1 Gene Start and end within genomic accession: 12202560 ...... 12208112 |
CDS Sequence | 103331480 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Penta Repeat sequence: (TGGAA)2 |
Repeat start & end within CDS | Repeat start: 561 Repeat end: 570 |
Forward primer | Primer sequence: GTTGTTGAGGGAGGTCAGCA Tm(°C): 59.891 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: GCTTTGAGGGCTAGCTGACA Tm(°C): 60.036 GC (%): 55 Size: 20 |
Primer start, end within sequence and product size | Start: 467 End: 790 Product size (bp): 324 |
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|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103331480 NCBI Gene Symbol: LOC103331480 |
Gene Aliases | |
Gene description & Other designations | Description: malate dehydrogenase [NADP]; chloroplastic Other designations: malate dehydrogenase [NADP]; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: LG5 Strand: minus Exon count: 14 |
Gene Location within genomic sequence | Genomic accession No. NC_024130.1 Gene Start and end within genomic accession: 12202560 ...... 12208112 |
CDS Sequence | 103331480 |
| Marker Information | |
Marker Type | PMTM |
Repeat type & sequence | Repeat type: Tri Repeat sequence: (GGA)3 |
Repeat start & end within CDS | Repeat start: 924 Repeat end: 932 |
Forward primer | Primer sequence: GTCAGCTAGCCCTCAAAGCA Tm(°C): 60.036 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: TGCAATTGACACGGCAGTTG Tm(°C): 59.969 GC (%): 50 Size: 20 |
Primer start, end within sequence and product size | Start: 772 End: 1019 Product size (bp): 248 |
JBrowse View | JBrowse |
|
| Gene Information | |
NCBI Gene Accession Number & Symbol | Accession Number: 103331480 NCBI Gene Symbol: LOC103331480 |
Gene Aliases | |
Gene description & Other designations | Description: malate dehydrogenase [NADP]; chloroplastic Other designations: malate dehydrogenase [NADP]; chloroplastic |
Chromosome, Strand & Exon count | Chromosome: LG5 Strand: minus Exon count: 14 |
Gene Location within genomic sequence | Genomic accession No. NC_024130.1 Gene Start and end within genomic accession: 12202560 ...... 12208112 |
CDS Sequence | 103331480 |
| Marker Information | |
Marker Type | PGTM |
Repeat type & sequence | Repeat type: Repeat sequence: |
Repeat start & end within CDS | Repeat start: Repeat end: |
Forward primer | Primer sequence: GTCAGCTAGCCCTCAAAGCA Tm(°C): 60.036 GC (%): 55 Size: 20 |
Reverse primer | Primer sequence: TGCAATTGACACGGCAGTTG Tm(°C): 59.969 GC (%): 50 Size: 20 |
Primer start, end within sequence and product size | Start: 772 End: 1019 Product size (bp): 248 |
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