|
| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103338505 NCBI Gene Symbol: LOC103338505 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; chloroplastic Other designations: malate dehydrogenase; chloroplastic |
| Chromosome, Strand & Exon count | Chromosome: LG7 Strand: plus Exon count: 2 |
| Gene Location within genomic sequence | Genomic accession No. NC_024132.1 Gene Start and end within genomic accession: 14949427 ...... 14951580 |
| CDS Sequence | 103338505 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Compound Repeat sequence: (AGA)3atctaaaactga(TTGATG)2 |
| Repeat start & end within CDS | Repeat start: 761 Repeat end: 793 |
| Forward primer | Primer sequence: GTCCAGAGGCCTTCATCCAC Tm(°C): 60.107 GC (%): 60 Size: 20 |
| Reverse primer | Primer sequence: CACCAGCCTTTGCCTCTACA Tm(°C): 59.963 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 607 End: 942 Product size (bp): 336 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103338505 NCBI Gene Symbol: LOC103338505 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; chloroplastic Other designations: malate dehydrogenase; chloroplastic |
| Chromosome, Strand & Exon count | Chromosome: LG7 Strand: plus Exon count: 2 |
| Gene Location within genomic sequence | Genomic accession No. NC_024132.1 Gene Start and end within genomic accession: 14949427 ...... 14951580 |
| CDS Sequence | 103338505 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Penta Repeat sequence: (TCTGA)2 |
| Repeat start & end within CDS | Repeat start: 1051 Repeat end: 1060 |
| Forward primer | Primer sequence: GGTGCTGGGTCTGCTACATT Tm(°C): 60.035 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: GTCACTGCTTGCTTGTTGGC Tm(°C): 60.596 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 939 End: 1237 Product size (bp): 299 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103338505 NCBI Gene Symbol: LOC103338505 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; chloroplastic Other designations: malate dehydrogenase; chloroplastic |
| Chromosome, Strand & Exon count | Chromosome: LG7 Strand: plus Exon count: 2 |
| Gene Location within genomic sequence | Genomic accession No. NC_024132.1 Gene Start and end within genomic accession: 14949427 ...... 14951580 |
| CDS Sequence | 103338505 |
| Marker Information | |
| Marker Type | PGTM |
| Repeat type & sequence | Repeat type: Repeat sequence: |
| Repeat start & end within CDS | Repeat start: Repeat end: |
| Forward primer | Primer sequence: CCACAGTCAAAGCCTTGTGC Tm(°C): 59.969 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: CGGTGGTTTCTTTGCCCAAG Tm(°C): 59.968 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 75 End: 204 Product size (bp): 130 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103335687 NCBI Gene Symbol: LOC103335687 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; glyoxysomal Other designations: malate dehydrogenase; glyoxysomal |
| Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 8 |
| Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 18590473 ...... 18593606 |
| CDS Sequence | 103335687 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Hexa Repeat sequence: (GATGAA)2 |
| Repeat start & end within CDS | Repeat start: 195 Repeat end: 206 |
| Forward primer | Primer sequence: TCCACATGGAGAACACTGCC Tm(°C): 59.963 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: CACCAAATCCACTCCGGTCA Tm(°C): 59.964 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 73 End: 353 Product size (bp): 281 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103335687 NCBI Gene Symbol: LOC103335687 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; glyoxysomal Other designations: malate dehydrogenase; glyoxysomal |
| Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 8 |
| Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 18590473 ...... 18593606 |
| CDS Sequence | 103335687 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Tri Repeat sequence: (GCA)3 |
| Repeat start & end within CDS | Repeat start: 312 Repeat end: 320 |
| Forward primer | Primer sequence: CGTCACCTCCGATATCAGCC Tm(°C): 60.039 GC (%): 60 Size: 20 |
| Reverse primer | Primer sequence: ACGTTGACAATGGCGTTTGG Tm(°C): 59.97 GC (%): 50 Size: 20 |
| Primer start, end within sequence and product size | Start: 254 End: 481 Product size (bp): 228 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103335687 NCBI Gene Symbol: LOC103335687 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; glyoxysomal Other designations: malate dehydrogenase; glyoxysomal |
| Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 8 |
| Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 18590473 ...... 18593606 |
| CDS Sequence | 103335687 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Hexa Repeat sequence: (AGCTGG)2 |
| Repeat start & end within CDS | Repeat start: 789 Repeat end: 800 |
| Forward primer | Primer sequence: AGCCTCCATGCTCTTTCACC Tm(°C): 60.035 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: AGCCGTACCTTGGATGCAAA Tm(°C): 59.962 GC (%): 50 Size: 20 |
| Primer start, end within sequence and product size | Start: 703 End: 946 Product size (bp): 244 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103335687 NCBI Gene Symbol: LOC103335687 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; glyoxysomal Other designations: malate dehydrogenase; glyoxysomal |
| Chromosome, Strand & Exon count | Chromosome: LG1 Strand: minus Exon count: 8 |
| Gene Location within genomic sequence | Genomic accession No. NC_024126.1 Gene Start and end within genomic accession: 18590473 ...... 18593606 |
| CDS Sequence | 103335687 |
| Marker Information | |
| Marker Type | PGTM |
| Repeat type & sequence | Repeat type: Repeat sequence: |
| Repeat start & end within CDS | Repeat start: Repeat end: |
| Forward primer | Primer sequence: CCAAACGCCATTGTCAACGT Tm(°C): 59.97 GC (%): 50 Size: 20 |
| Reverse primer | Primer sequence: CAGCTTTGGCCTCAACAACC Tm(°C): 59.967 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 462 End: 792 Product size (bp): 331 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103324868 NCBI Gene Symbol: LOC103324868 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; mitochondrial-like Other designations: malate dehydrogenase; mitochondrial-like |
| Chromosome, Strand & Exon count | Chromosome: LG3 Strand: plus Exon count: 6 |
| Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 2695782 ...... 2697677 |
| CDS Sequence | 103324868 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Hexa Repeat sequence: (CTCCCT)2 |
| Repeat start & end within CDS | Repeat start: 159 Repeat end: 170 |
| Forward primer | Primer sequence: ACTGTCGCTCCTCATGAAGC Tm(°C): 60.108 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: AGCGCTCAAAGACTTGACGA Tm(°C): 59.968 GC (%): 50 Size: 20 |
| Primer start, end within sequence and product size | Start: 122 End: 383 Product size (bp): 262 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103324868 NCBI Gene Symbol: LOC103324868 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; mitochondrial-like Other designations: malate dehydrogenase; mitochondrial-like |
| Chromosome, Strand & Exon count | Chromosome: LG3 Strand: plus Exon count: 6 |
| Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 2695782 ...... 2697677 |
| CDS Sequence | 103324868 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Penta Repeat sequence: (TAAGG)2 |
| Repeat start & end within CDS | Repeat start: 879 Repeat end: 888 |
| Forward primer | Primer sequence: TTGAAGGGTCTAAACGGGGC Tm(°C): 59.963 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: TCCAAGAACTTCCTCCACGC Tm(°C): 59.965 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 795 End: 920 Product size (bp): 126 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103324868 NCBI Gene Symbol: LOC103324868 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; mitochondrial-like Other designations: malate dehydrogenase; mitochondrial-like |
| Chromosome, Strand & Exon count | Chromosome: LG3 Strand: plus Exon count: 6 |
| Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 2695782 ...... 2697677 |
| CDS Sequence | 103324868 |
| Marker Information | |
| Marker Type | PGTM |
| Repeat type & sequence | Repeat type: Repeat sequence: |
| Repeat start & end within CDS | Repeat start: Repeat end: |
| Forward primer | Primer sequence: CTCCCTCTCCCTGTACGACA Tm(°C): 60.034 GC (%): 60 Size: 20 |
| Reverse primer | Primer sequence: AGCGCTCAAAGACTTGACGA Tm(°C): 59.968 GC (%): 50 Size: 20 |
| Primer start, end within sequence and product size | Start: 158 End: 383 Product size (bp): 226 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103326072 NCBI Gene Symbol: LOC103326072 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; mitochondrial Other designations: malate dehydrogenase; mitochondrial |
| Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 7 |
| Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 10944389 ...... 10947461 |
| CDS Sequence | 103326072 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Di Repeat sequence: (CT)5 |
| Repeat start & end within CDS | Repeat start: 163 Repeat end: 172 |
| Forward primer | Primer sequence: CATGTCCCTCGTCAGATCCG Tm(°C): 59.969 GC (%): 60 Size: 20 |
| Reverse primer | Primer sequence: ATGATTACGACGTCGGCTCC Tm(°C): 59.97 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 11 End: 298 Product size (bp): 288 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103326072 NCBI Gene Symbol: LOC103326072 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; mitochondrial Other designations: malate dehydrogenase; mitochondrial |
| Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 7 |
| Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 10944389 ...... 10947461 |
| CDS Sequence | 103326072 |
| Marker Information | |
| Marker Type | PMTM |
| Repeat type & sequence | Repeat type: Hexa Repeat sequence: (AATGTT)2 |
| Repeat start & end within CDS | Repeat start: 562 Repeat end: 573 |
| Forward primer | Primer sequence: AGTCAACTCTACGGTCCCGA Tm(°C): 59.963 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: GCAGATCCCTTTCCAGCCTT Tm(°C): 60.034 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 434 End: 745 Product size (bp): 312 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103326072 NCBI Gene Symbol: LOC103326072 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; mitochondrial Other designations: malate dehydrogenase; mitochondrial |
| Chromosome, Strand & Exon count | Chromosome: LG3 Strand: minus Exon count: 7 |
| Gene Location within genomic sequence | Genomic accession No. NC_024128.1 Gene Start and end within genomic accession: 10944389 ...... 10947461 |
| CDS Sequence | 103326072 |
| Marker Information | |
| Marker Type | PGTM |
| Repeat type & sequence | Repeat type: Repeat sequence: |
| Repeat start & end within CDS | Repeat start: Repeat end: |
| Forward primer | Primer sequence: CATGTCCCTCGTCAGATCCG Tm(°C): 59.969 GC (%): 60 Size: 20 |
| Reverse primer | Primer sequence: ATGATTACGACGTCGGCTCC Tm(°C): 59.97 GC (%): 55 Size: 20 |
| Primer start, end within sequence and product size | Start: 11 End: 298 Product size (bp): 288 |
| JBrowse View | JBrowse |
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| Gene Information | |
| NCBI Gene Accession Number & Symbol | Accession Number: 103334965 NCBI Gene Symbol: LOC103334965 |
| Gene Aliases | |
| Gene description & Other designations | Description: malate dehydrogenase; glyoxysomal Other designations: malate dehydrogenase; glyoxysomal |
| Chromosome, Strand & Exon count | Chromosome: LG6 Strand: plus Exon count: 9 |
| Gene Location within genomic sequence | Genomic accession No. NC_024131.1 Gene Start and end within genomic accession: 6182719 ...... 6185471 |
| CDS Sequence | 103334965 |
| Marker Information | |
| Marker Type | PGTM |
| Repeat type & sequence | Repeat type: Repeat sequence: |
| Repeat start & end within CDS | Repeat start: Repeat end: |
| Forward primer | Primer sequence: CGCATTGCAAGGATCTCAGC Tm(°C): 59.971 GC (%): 55 Size: 20 |
| Reverse primer | Primer sequence: GCACCCAAAATCGCCACTTT Tm(°C): 59.967 GC (%): 50 Size: 20 |
| Primer start, end within sequence and product size | Start: 27 End: 154 Product size (bp): 128 |
| JBrowse View | JBrowse |
